Schedule -- Peel

Notes:

  • This schedule is subject to change.
  • RECITATIONS/LABS BEGIN FEBRUARY 2
  • For the Reading Assignments, you need to ask a question online in Webassign on 1-3 of the assigned readings. These are generally due at 9 PM the previous night and worth about 1 participation point per reading. Yes, they add up.
  • Some slides will be posted in Adobe pdf format on Canvas after (never before!) the class takes place. Note that these slides only represent a skeleton of the presentation and will rarely include solutions to problems and questions posed, derivations, or representations of class discussions. If you miss a class, these notes do not suffice to fill you in on what happened! Be sure to check with someone who actually attended!

Date Class Reading Content Quiz

Week 1

No Recitation No Lab
M 1/26 1 1 Introduction to the class
1.1 The disciplines: Physics, Biology, Chemistry, and Math
1.1.1 Science as making models
1.1.4 What Physics can do for Biologists
1.2 Thinking about Thinking and Knowing
1.2.1 The nature of scientific knowledge
Why is this class different? Bring your clickers!
W 1/28 2 2. Modeling with mathematics
2.1 Using math in science
2.1.1 How math in science is different from math in math
2.1.2 Measurement
2.1.3 Dimensions and units
2.1.3.1 Complex dimensions and dimensional analysis
2.1.3.2 Changing units
2.1.4 Estimation 
2.1.4.1 Useful numbers
Measurement and Math: Power of Scaling
Thinking vs. Intution
Estimation
F 1/30 3 I-1 Interlude 1: The Main Question: How do things move?
3 Kinematics: Where and When?
3.1.1 Coordinates
3.1.2 Vectors
3.1.3 Time 
3.1.4 Kinematics Graphs
Selective Attention
Measurement and Math: Dimensions and Units II
 

Week 2

Recitation: How big is a worm Lab 0: Survey and Intro
M 2/2 4 2.2.5 Values, change, and rates of change
2.2.5.1 Derivatives
2.2.5.1.1 What is a derivative, anyway?
3.2 Kinematic Variables
What is a Model?
Coordinates and graphs
Laying the Calculus Groundwork
Quiz 1
Bring Your Clickers!
W 2/4 5 3.2.1 Velocity
3.2.1.1 Average velocity
3.2.1.2 Instantaneous velocity
3.2.1.3 Calculating with average velocity
Beginning kinematics
Velocity as a rate of change
algebraically and instantaneously (calculus!)
 
F 2/6 6 3.2.2 Acceleration
3.2.2.1 Average acceleration
3.2.2.2 Instantaneous acceleration
3.2.2.3 Calculating with constant acceleration
Making sense of x, v, a vs. t

Week 3

Recitation: The cat and the antelope Lab 1a: Quantifying motion from Images and Videos
M 2/9 7 4.1 Newton's Laws
4.1.1 Physical content of Newton's Laws
4.1.1.1 Object egotism
4.1.1.2 Inertia
Making sense of x, v, a vs. t (cont.)
Hints of Newton's laws
Quiz 2
W 2/11 8 4.1.1.3 Interactions
4.1.1.4 Superposition:
4.1.1.5 Mass
4.1.1.6 Reciprocity
Wrapping up kinematics
Developing intution for x, v, a
 
F 2/13 9 4.1.2 Formulation of Newton's Laws as foothold principles
4.1.2.1 Quantifying Impulse and Force
4.1.2.2 Newton 0
4.1.2.3 Newton's 1st law
Begin Newton's laws (What's a force?)
(The reading on impulse is foreshadowing for
4.3.1 Linear Momentum later this semester...)

Week 4

Recitation: Forces for objects & systems Lab 1b: Quantifying motion from Images and Videos
M 2/16 10 4.1.2.2.1 Free-body diagrams
4.1.2.2.2 System Schema Introduction
4.1.2.3 Newton's 1st law (yes, again)
4.1.2.4 Newton's 2nd law 
4.1.2.4.1 Reading the content in Newton's 2nd law 
System Schema
Free Body Diagrams
Quiz 3
W 2/18 11 4.1.2.4.2 Newton 2 as a stepping rule
4.1.2.4.2.1 Newton 2 on a spreadsheet
4.1.2.5 Newton's 3rd law 
4.1.2.5.1 Using system schemas for Newton's 3rd law
Newton 2 and 3 (how NOT to look at N3)
F 2/20 12 4.2 Kinds of Forces
4.2.1 Springs 
4.2.1.1 Realistic springs
4.2.1.2 Normal forces
4.2.1.2.1 A simple model of solid matter
Forces: Springs, tension, normal, and friction forces
Catchup Day - Open Season Questions

Week 5

Recitation: The spring constant of DNA Lab 2a: Inferring force characteristics from motion analysis
M 2/23 13 4.2.1.3 Tension forces 
4.2.2 Resistive forces
4.2.2.1 Friction
Being realistic about friction (esp. biology!) Quiz 4
W 2/25 14 4.2.2.2 Viscosity
4.2.2.3 Drag
4.2.3 Gravitational forces
Types of resistive forces in gasses and liquids  
F 2/27 15 4.2.3.1 Flat-earth gravity
4.2.3.1.1 Free-fall in flat-earth gravity
4.2.3.3 The gravitational field
Gravity for intuition's sake  

Week 6

Recitation: Motion of a paramecium Lab 2b: Inferring force characteristics from motion analysis
M 3/2 16 4.2.4 Electric forces
4.2.4.1 Charge and the structure of matter
4.2.4.2 Polarization
4.2.4.3 Coulomb's law 
Kinds of forces, charges Quiz 5
W 3/4 17 3.1.2 Vectors (yes, again)
3.1.2.1 Adding Vectors
3.1.2.1.1 Example: vector addition
3.1.2.1.2 Example: vector subtraction
Adding vectors in 2 (or more) dimensions
F 3/6 (18)
Snow Day!

Week 7

Recitation: Electrostatic force and Hydrogen bonds
Lab 3a: Observing Brownian motion
M 3/9 19 MIDTERM 1 (on lectures 1-15)
W 3/11 20 4.2.4.3.1 Coulomb's law -- vector character
4.2.4.3.2 Reading the content in Coulomb's law

Charges, induction,
Coulomb's law

F 3/13 21 4.2.4.4 The Electric field
4.3 Coherent vs. random motion
Go over exam

Week 8

Recitation: Electrophoresis Lab 3b: Observing Brownian motion
M 3/23 22 4.3 Coherent vs. random motion
4.3.1 Linear momentum
4.3.1.1 Restating Newton's 2nd law: momentum

Momentum

Quiz 6
W 3/25 23 4.3.1.2 Momentum conservation
4.3.2 The role of randomness: Biological implications
Emergence
F 3/27 24 4.3.3 Diffusion and random walks
4.3.3.1 Fick's law
Random motion

Week 9

Recitation: Gas properties and pressure Lab 3c: Observing Brownian motion
M 3/30 25 5. Macro models of matter
5.1.1 Density-solids
I-2: Interlude 2: The Micro to Macro Connection

The finer detail small scale picture

Quiz 7
W 4/1 26 5.1.6 Soft matter
5.1.2 Young's modulus
5.1.6.1 Mechanical properties of cells
F 4/3 27 5.2 Fluids
5.2.1 Pressure
7.1 Kinetic theory: the ideal gas law

Kinetic theory of gases

Pressure

Week 10

Recitation: Diffusion in cells Lab 4a: Brownian motion vs. directed forces
M 4/6 28 3.1.2.3 The gradient: a vector derivative
5.2.2 Archimedes' Principle
5.2.3 Buoyancy
Fluids: Buoyancy, surface tension Quiz 8
W 4/8 29 5.2.5.2.1 Surface tension
5.2.6 Fluid flow
5.2.6.1 Quantifying fluid flow
5.2.6.2 The continuity equation
Continuity (A1v1 = A2v2)

Fluid flow

F 4/10 30 5.2.6.3 Internal flow -- the HP equation
6. Energy: The Quantity of Motion
Why arteriosclerosis is worse than you think

Week 11

Recitation: Fluid flow
  • Estimating capillaries
  • Hold the mayo
Lab 4b: Brownian motion vs. directed forces
M 4/13 31 6.1 Kinetic energy and the work-energy theorem
6.1.1 Reading the content in the Work-Energy theorem
Energy is more abstract than you think Quiz 9
W 4/15 32
F 4/17 (33) MIDTERM 2

Week 12

Recitation: Energy skate park and collisions Lab 5a:Motion and Work in living systems
M 4/20 34 6.2 Energy of place -- potential energy
6.2.1 Gravitational potential energy

Energy that can potentially be used to move

W 4/22 35 6.2.2 Spring potential energy
6.2.3 Electric potential energy
6.3 The conservation of mechanical energy
Conservation of energy
F 4/24 36 6.3.1 Interpreting mechanical energy graphs
6.3.2 Mechanical energy loss -- thermal energy
6.3.3 Forces from potential energy
Conservation of energy? Go over exam

Week 13

No Recitation No Lab
M 4/27 37 6.4.1 Energy at the sub-molecular level
6.4.2 Atomic and Molecular forces
Quanta are smaller than Hollywood thinks Quiz 10
W 4/29 38 6.4.2.1 Interatomic forces
6.4.2.1.1 The Lennard-Jones Potential (broken link)
6.4.2.2 Chemical bonding
A useful model for bonds
F 5/1 39 5.3 Heat and temperature
5.3.2 Thermal properties of matter
5.3.2.1 Thermal energy and specific heat
More emergent properties

Week 14

Recitation: Protein stability Lab 5b: Motion and Work in living systems
M 5/4 40 5.3.2.2 Heat capacity
5.3.2.3 Heat transfer

Energy and heat

Quiz 11
W 5/6 41 7. Thermodynamics and Statistical Physics
7.2 The 1st law of thermodynamics
7.3 The 2nd law of thermodynamics
Physics 132 foreshadowing  
F 5/8 42 7.3.1 The 2nd Law of Thermodynamics: A Probabilistic Law
7.3.2 Implications of the Second Law of Thermodynamics
7.4.1 Why we need a 2nd Law of Thermodynamics

Week 15

Recitation: Temperature regulation Lab: Makeup lab and survey
M 5/11 43 No reading for the last day (No quiz)

Exam Week

TBD FINAL EXAM Location TBD